Cream Cheese Zucchini Muffins Recipe

Using my go-to zucchini bread recipe as the starting point, these soft cream cheese zucchini muffins are deliciously spiced with cinnamon and stuffed with a cheesecake style filling. Before baking, sprinkle with coarse sugar for a little sparkling crunch on top.

Zucchini Muffins, Upgraded

These muffins are downright DELICIOUS. Using a variation of my absolute favorite zucchini bread recipe—an old family recipe that won 1st place in a state fair—we’re baking muffins stuffed with sweet cream cheese. They taste like dessert! I got the recipe idea from these pumpkin cream cheese muffins, a total fall favorite. Here we’re swapping pumpkin for zucchini and skipping the crumb topping. Though you could definitely add it here if desired!

Here’s why you’ll love them:

• Easy muffin batter using basic ingredients
• Soft, moist, filled with creamy filling
• Warm spice flavors like cinnamon and nutmeg
• Recipe makes just 10, but can easily be doubled
• Hidden veggies—you can’t taste the zucchini!

Overview: How to Make Cream Cheese Zucchini Muffins

Today’s muffin recipe is similar to my regular zucchini muffins. The batter yields slightly fewer muffins, but if you want a full dozen, you can use the plain zucchini muffins batter and stretch the cream cheese filling to fill all 12.

The full written recipe is below, but let’s quickly walk through the steps first.

Layer the zucchini batter and cream cheese batter together in your muffin liners. This recipe yields 10 muffins.

Try my zucchini crumb cake, zucchini cake, or peanut butter chocolate chip zucchini bread next! For something savory, you’ll love these zucchini fritters, this feta & herb zucchini casserole, or these zucchini biscuits. For even more inspiration, here are 20+ sweet and savory zucchini recipes to browse.

Possible Variations

• Carrot, Apple, or Banana: You can replace the shredded zucchini with shredded carrot for cream cheese carrot muffins. I always like a little ginger with carrot, so feel free to add 1/4 teaspoon of ground ginger to the carrot batter. You could replace the zucchini with shredded apple, too! This cream cheese filling would be wonderful with my banana muffins batter as well. For banana, carrot, or apple, follow the baking instructions and time(s) written below.
• Loaf instead of muffins: Use my zucchini bread recipe and feel free to skip the chocolate chips. Add half of the batter to the greased 9×5-inch loaf pan, spoon and gently spread this cream cheese filling on top, then carefully spread remaining zucchini batter on top. Use a toothpick or knife to swirl together, which will prevent the loaf from separating. (Not necessary for muffins.) Add about 5 minutes to the bread’s bake time.
• Double the recipe: To yield about 20-22 muffins, feel free to double the recipe below by doubling each ingredient. Instead of 2 egg yolks in the cream cheese filling, 1 full egg will work.